Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter suwonensis |
| Strain | strain DSM 18130 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1755941 bp
Thymine Count
1751697 bp
Guanine Count
1139050 bp
Cytosine Count
1154468 bp
Genome Length
5803831 bp
Protein-coding Genes
4873 genes
Non-Coding Genes
59 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase | SAMN04488511_10476 | Not Available | Positive | 1613947 - 1615926 | 73455.6 |
| miniconductance mechanosensitive channel | SAMN04488511_10477 | Not Available | Positive | 1616173 - 1617447 | 48876.8 |
| hypothetical protein | SAMN04488511_10478 | Not Available | Positive | 1617440 - 1617805 | 14514.4 |
| uncharacterised protein family (upf0158) | SAMN04488511_10479 | Not Available | Negative | 1617909 - 1618124 | 8442.87 |
| pimeloyl-acp methyl ester carboxylesterase | SAMN04488511_10480 | Not Available | Negative | 1618251 - 1619078 | 30410.2 |
| uncharacterized membrane protein | SAMN04488511_10482 | Not Available | Negative | 1619629 - 1620012 | 14872.3 |
| glutamyl-trna reductase | SAMN04488511_10483 | Not Available | Positive | 1620151 - 1621377 | 46556.4 |
| hydroxymethylbilane synthase | SAMN04488511_10484 | Not Available | Positive | 1622022 - 1623602 | 58828.6 |
| porphobilinogen synthase | SAMN04488511_10485 | Not Available | Positive | 1623748 - 1624716 | 35879.1 |
| glutamate-1-semialdehyde 2,1-aminomutase | SAMN04488511_10486 | Not Available | Positive | 1624891 - 1626261 | 49776.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
