Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter suwonensis |
| Strain | strain DSM 18130 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1755941 bp
Thymine Count
1751697 bp
Guanine Count
1139050 bp
Cytosine Count
1154468 bp
Genome Length
5803831 bp
Protein-coding Genes
4873 genes
Non-Coding Genes
59 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 23s rrna (cytosine1962-c5)-methyltransferase | SAMN04488511_10464 | Not Available | Negative | 1607061 - 1607942 | 33340.1 |
| pin domain nuclease, a component of toxin-antitoxin system (pin domain) | SAMN04488511_10465 | Not Available | Negative | 1607943 - 1608329 | 14942.3 |
| protein of unknown function | SAMN04488511_10466 | Not Available | Negative | 1608329 - 1608571 | 9072.74 |
| phospholipid/cholesterol/gamma-hch transport system atp-binding protein | SAMN04488511_10467 | Not Available | Negative | 1608592 - 1609344 | 28159.1 |
| phospholipid/cholesterol/gamma-hch transport system permease protein | SAMN04488511_10468 | Not Available | Negative | 1609344 - 1610078 | 26158.7 |
| hypothetical protein | SAMN04488511_10469 | Not Available | Positive | 1610103 - 1610222 | 4884.08 |
| short-chain dehydrogenase | SAMN04488511_10470 | Not Available | Positive | 1610226 - 1610915 | 25134.1 |
| phage shock protein c (pspc) family protein | SAMN04488511_10471 | Not Available | Positive | 1610923 - 1611630 | 26496.7 |
| hypothetical protein | SAMN04488511_10472 | Not Available | Positive | 1611635 - 1612615 | 36394.2 |
| uncharacterized membrane protein yckc, rdd family | SAMN04488511_10473 | Not Available | Positive | 1612720 - 1613331 | 23145.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
