Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter suwonensis |
| Strain | strain DSM 18130 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1755941 bp
Thymine Count
1751697 bp
Guanine Count
1139050 bp
Cytosine Count
1154468 bp
Genome Length
5803831 bp
Protein-coding Genes
4873 genes
Non-Coding Genes
59 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ribose-5-phosphate isomerase | SAMN04488511_10421 | Not Available | Positive | 1553417 - 1554106 | 24316.4 |
| hypothetical protein | SAMN04488511_10422 | Not Available | Positive | 1554406 - 1554795 | 14830.6 |
| hypothetical protein | SAMN04488511_10423 | Not Available | Positive | 1555273 - 1556592 | 47852.7 |
| membrane protein | SAMN04488511_10424 | Not Available | Positive | 1556753 - 1557721 | 35306.7 |
| secondary thiamine-phosphate synthase enzyme | SAMN04488511_10425 | Not Available | Negative | 1557722 - 1558144 | 16026.0 |
| predicted nuclease of restriction endonuclease-like (recb) superfamily, duf1016 family | SAMN04488511_10426 | Not Available | Negative | 1558145 - 1559203 | 41700.1 |
| predicted membrane protein | SAMN04488511_10427 | Not Available | Negative | 1559262 - 1560296 | 39769.4 |
| transporter, cpa2 family | SAMN04488511_10428 | Not Available | Negative | 1560433 - 1562646 | 81705.1 |
| riboflavin kinase / fmn adenylyltransferase | SAMN04488511_10429 | Not Available | Negative | 1563310 - 1564299 | 37095.6 |
| uncharacterized membrane-anchored protein yitt, contains duf161 and duf2179 domains | SAMN04488511_10430 | Not Available | Negative | 1564311 - 1565171 | 31130.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
