Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter suwonensis |
| Strain | strain DSM 18130 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1755941 bp
Thymine Count
1751697 bp
Guanine Count
1139050 bp
Cytosine Count
1154468 bp
Genome Length
5803831 bp
Protein-coding Genes
4873 genes
Non-Coding Genes
59 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glucokinase | SAMN04488511_10411 | Not Available | Positive | 1536049 - 1536924 | 31656.0 |
| f5/8 type c domain-containing protein | SAMN04488511_10412 | Not Available | Positive | 1537677 - 1538237 | 20445.1 |
| tonb-linked outer membrane protein, susc/raga family | SAMN04488511_10413 | Not Available | Positive | 1538364 - 1541564 | 116431.0 |
| starch-binding associating with outer membrane | SAMN04488511_10414 | Not Available | Positive | 1541575 - 1543401 | 67574.1 |
| hypothetical protein | SAMN04488511_10415 | Not Available | Positive | 1543462 - 1544433 | 36625.3 |
| peptidase | SAMN04488511_10416 | Not Available | Positive | 1544495 - 1545475 | 37122.1 |
| peptidase | SAMN04488511_10417 | Not Available | Positive | 1545938 - 1546576 | 24004.6 |
| alpha-1,2-mannosidase, putative | SAMN04488511_10418 | Not Available | Positive | 1546615 - 1548903 | 85705.3 |
| protein of unknown function | SAMN04488511_10419 | Not Available | Positive | 1549018 - 1550448 | 51769.3 |
| cytochrome c | SAMN04488511_10420 | Not Available | Positive | 1550460 - 1552421 | 72798.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
