Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter suwonensis |
| Strain | strain DSM 18130 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1755941 bp
Thymine Count
1751697 bp
Guanine Count
1139050 bp
Cytosine Count
1154468 bp
Genome Length
5803831 bp
Protein-coding Genes
4873 genes
Non-Coding Genes
59 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acyl-coa hydrolase | SAMN04488511_103387 | Not Available | Positive | 1495396 - 1495782 | 14349.4 |
| methyltransferase domain-containing protein | SAMN04488511_103388 | Not Available | Positive | 1495844 - 1496509 | 24906.7 |
| phosphatidate cytidylyltransferase | SAMN04488511_103389 | Not Available | Negative | 1496672 - 1497481 | 30482.0 |
| putative signal transducing protein | SAMN04488511_103390 | Not Available | Negative | 1497525 - 1497731 | 7533.97 |
| hypothetical protein | SAMN04488511_103391 | Not Available | Negative | 1497712 - 1498638 | 35058.9 |
| pp_01263 | SAMN04488511_103392 | Not Available | Positive | 1498683 - 1499690 | Not Available |
| apag protein | SAMN04488511_103393 | Not Available | Positive | 1499725 - 1500111 | 14549.2 |
| hypothetical protein | SAMN04488511_103395 | Not Available | Negative | 1500649 - 1501344 | 25455.0 |
| glycine/d-amino acid oxidase | SAMN04488511_103396 | Not Available | Positive | 1501428 - 1502567 | 42459.4 |
| formyltetrahydrofolate deformylase | SAMN04488511_103397 | Not Available | Negative | 1502795 - 1503634 | 31550.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
