Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter suwonensis |
| Strain | strain DSM 18130 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1755941 bp
Thymine Count
1751697 bp
Guanine Count
1139050 bp
Cytosine Count
1154468 bp
Genome Length
5803831 bp
Protein-coding Genes
4873 genes
Non-Coding Genes
59 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gliding motility-associated lipoprotein gldh | SAMN04488511_103314 | Not Available | Negative | 1422567 - 1423064 | 19138.0 |
| cell fate regulator yaat, psp1 superfamily (controls sporulation, competence, biofilm development) | SAMN04488511_103315 | Not Available | Negative | 1423033 - 1424568 | 57129.8 |
| dna polymerase-3 subunit delta' | SAMN04488511_103316 | Not Available | Negative | 1424570 - 1425718 | 43032.9 |
| putative holliday junction resolvase | SAMN04488511_103317 | Not Available | Positive | 1426108 - 1426524 | 15714.1 |
| predicted o-methyltransferase yrrm | SAMN04488511_103318 | Not Available | Positive | 1426531 - 1427169 | 24198.4 |
| lysm domain-containing protein | SAMN04488511_103319 | Not Available | Positive | 1427248 - 1427925 | 25624.8 |
| flagellum-specific peptidoglycan hydrolase flgj | SAMN04488511_103320 | Not Available | Positive | 1428018 - 1428860 | 32202.1 |
| hypothetical protein | SAMN04488511_103321 | Not Available | Positive | 1428909 - 1429661 | 28699.7 |
| hypothetical protein | SAMN04488511_103322 | Not Available | Positive | 1429658 - 1429981 | 12824.0 |
| protein of unknown function | SAMN04488511_103323 | Not Available | Positive | 1430076 - 1431083 | 38257.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
