Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter suwonensis |
| Strain | strain DSM 18130 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1755941 bp
Thymine Count
1751697 bp
Guanine Count
1139050 bp
Cytosine Count
1154468 bp
Genome Length
5803831 bp
Protein-coding Genes
4873 genes
Non-Coding Genes
59 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tonb-linked outer membrane protein, susc/raga family | SAMN04488511_103304 | Not Available | Negative | 1406872 - 1410042 | 114991.0 |
| hypothetical protein | SAMN04488511_103305 | Not Available | Negative | 1410225 - 1410389 | 6155.63 |
| hypothetical protein | SAMN04488511_103306 | Not Available | Positive | 1410826 - 1411518 | 26153.3 |
| protein of unknown function | SAMN04488511_103307 | Not Available | Negative | 1411805 - 1412731 | 32862.2 |
| starch-binding associating with outer membrane | SAMN04488511_103308 | Not Available | Negative | 1412745 - 1414259 | 55410.2 |
| tonb-linked outer membrane protein, susc/raga family | SAMN04488511_103309 | Not Available | Negative | 1414285 - 1417431 | 114089.0 |
| hypothetical protein | SAMN04488511_103310 | Not Available | Positive | 1417873 - 1418052 | 6574.19 |
| zinc carboxypeptidase | SAMN04488511_103311 | Not Available | Negative | 1418199 - 1420694 | 93716.6 |
| udp-n-acetylmuramoyl-tripeptide--d-alanyl-d- alanine ligase | SAMN04488511_103312 | Not Available | Positive | 1420757 - 1422079 | 48714.2 |
| hypothetical protein | SAMN04488511_103313 | Not Available | Negative | 1422081 - 1422554 | 17793.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
