Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter suwonensis |
| Strain | strain DSM 18130 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1755941 bp
Thymine Count
1751697 bp
Guanine Count
1139050 bp
Cytosine Count
1154468 bp
Genome Length
5803831 bp
Protein-coding Genes
4873 genes
Non-Coding Genes
59 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| methylmalonyl-coa mutase, c-terminal domain | SAMN04488511_103200 | Not Available | Negative | 1297263 - 1297685 | 15276.9 |
| glutaminyl-trna synthetase | SAMN04488511_103201 | Not Available | Positive | 1297799 - 1299454 | 63403.0 |
| hypothetical protein | SAMN04488511_103202 | Not Available | Negative | 1299438 - 1299593 | 5792.3 |
| n-acetylmuramoyl-l-alanine amidase | SAMN04488511_103203 | Not Available | Negative | 1299859 - 1300701 | 31070.2 |
| peptidase family m49 | SAMN04488511_103204 | Not Available | Positive | 1300734 - 1302491 | 65656.0 |
| outer membrane receptor proteins, mostly fe transport | SAMN04488511_103205 | Not Available | Positive | 1303016 - 1305457 | 91309.5 |
| ribosomal protein s18 acetylase rimi | SAMN04488511_103206 | Not Available | Negative | 1305558 - 1306052 | 18792.8 |
| thiamine pyrophosphokinase | SAMN04488511_103207 | Not Available | Negative | 1306049 - 1306609 | 21036.0 |
| hypothetical protein | SAMN04488511_103208 | Not Available | Negative | 1306673 - 1307965 | 50103.9 |
| thiamine-phosphate diphosphorylase | SAMN04488511_103209 | Not Available | Negative | 1308025 - 1308669 | 23573.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
