Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter suwonensis |
| Strain | strain DSM 18130 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1755941 bp
Thymine Count
1751697 bp
Guanine Count
1139050 bp
Cytosine Count
1154468 bp
Genome Length
5803831 bp
Protein-coding Genes
4873 genes
Non-Coding Genes
59 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| xanthine dehydrogenase yags fad-binding subunit | SAMN04488511_10190 | Not Available | Negative | 101073 - 102056 | 35620.6 |
| xanthine dehydrogenase yagt iron-sulfur-binding subunit | SAMN04488511_10191 | Not Available | Negative | 102053 - 102676 | 22463.8 |
| hypothetical protein | SAMN04488511_10192 | Not Available | Negative | 103015 - 103734 | 28150.6 |
| 2-dehydro-3-deoxyphosphooctonate aldolase (kdo 8-p synthase) | SAMN04488511_10193 | Not Available | Negative | 103734 - 104546 | 29192.4 |
| atp-dependent dna helicase recq | SAMN04488511_10194 | Not Available | Negative | 104636 - 106864 | 83648.5 |
| arabinose-5-phosphate isomerase | SAMN04488511_10195 | Not Available | Positive | 106917 - 107885 | 34378.9 |
| mannose-1-phosphate guanylyltransferase (gdp) | SAMN04488511_10196 | Not Available | Positive | 107900 - 108991 | 41051.2 |
| 23s rrna (guanosine2251-2'-o)-methyltransferase | SAMN04488511_10197 | Not Available | Negative | 109432 - 110196 | 27743.9 |
| replicative dna helicase | SAMN04488511_10198 | Not Available | Positive | 110317 - 111957 | 61095.4 |
| outer membrane protein beta-barrel domain-containing protein | SAMN04488511_10199 | Not Available | Negative | 112367 - 112984 | 23053.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
