Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter suwonensis |
| Strain | strain DSM 18130 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1755941 bp
Thymine Count
1751697 bp
Guanine Count
1139050 bp
Cytosine Count
1154468 bp
Genome Length
5803831 bp
Protein-coding Genes
4873 genes
Non-Coding Genes
59 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lysophospholipase l1 | SAMN04488511_103159 | Not Available | Positive | 1256951 - 1257691 | 27500.2 |
| acyl-coa reductase | SAMN04488511_103160 | Not Available | Negative | 1258565 - 1260190 | 60255.7 |
| mfs transporter, acs family, hexuronate transporter | SAMN04488511_103161 | Not Available | Negative | 1260311 - 1261756 | 53227.1 |
| 2-dehydro-3-deoxyphosphogluconate aldolase / (4s)-4-hydroxy-2-oxoglutarate aldolase | SAMN04488511_103162 | Not Available | Negative | 1261785 - 1262447 | 24106.6 |
| 2-dehydro-3-deoxygluconokinase | SAMN04488511_103163 | Not Available | Negative | 1262444 - 1263493 | 38709.2 |
| d-glucuronate isomerase | SAMN04488511_103164 | Not Available | Negative | 1263608 - 1265008 | 53707.5 |
| altronate hydrolase | SAMN04488511_103165 | Not Available | Negative | 1265343 - 1266989 | 59753.4 |
| tagaturonate reductase | SAMN04488511_103166 | Not Available | Negative | 1266991 - 1268502 | 56282.6 |
| pectate lyase, pela/pel-15e family | SAMN04488511_103167 | Not Available | Negative | 1268578 - 1269645 | 39946.7 |
| unsaturated rhamnogalacturonyl hydrolase | SAMN04488511_103168 | Not Available | Negative | 1269789 - 1271723 | 72247.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
