Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter suwonensis |
| Strain | strain DSM 18130 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1755941 bp
Thymine Count
1751697 bp
Guanine Count
1139050 bp
Cytosine Count
1154468 bp
Genome Length
5803831 bp
Protein-coding Genes
4873 genes
Non-Coding Genes
59 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| outer membrane protein beta-barrel family protein | SAMN04488511_103149 | Not Available | Positive | 1243357 - 1244211 | 32110.8 |
| glpgli family protein | SAMN04488511_103150 | Not Available | Positive | 1244263 - 1245036 | 28968.9 |
| camp-binding domain of crp or a regulatory subunit of camp-dependent protein kinases | SAMN04488511_103151 | Not Available | Positive | 1245140 - 1245709 | 22679.4 |
| alkylhydroperoxidase ahpd family core domain-containing protein | SAMN04488511_103152 | Not Available | Positive | 1246049 - 1246483 | 16179.7 |
| 23s rrna (cytosine1962-c5)-methyltransferase | SAMN04488511_103153 | Not Available | Negative | 1246584 - 1247768 | 43827.5 |
| transcriptional regulator, laci family | SAMN04488511_103154 | Not Available | Negative | 1247892 - 1248908 | 37956.6 |
| tonb-linked outer membrane protein, susc/raga family | SAMN04488511_103155 | Not Available | Positive | 1249170 - 1252352 | 117178.0 |
| starch-binding associating with outer membrane | SAMN04488511_103156 | Not Available | Positive | 1252375 - 1254171 | 66614.1 |
| protein of unknown function | SAMN04488511_103157 | Not Available | Positive | 1254182 - 1255747 | 55623.0 |
| pectinesterase | SAMN04488511_103158 | Not Available | Positive | 1255924 - 1256946 | 37762.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
