Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter suwonensis |
| Strain | strain DSM 18130 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1755941 bp
Thymine Count
1751697 bp
Guanine Count
1139050 bp
Cytosine Count
1154468 bp
Genome Length
5803831 bp
Protein-coding Genes
4873 genes
Non-Coding Genes
59 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lysr family transcriptional regulator, hydrogen peroxide-inducible genes activator | SAMN04488511_103129 | Not Available | Positive | 1219650 - 1220582 | 35123.1 |
| hypothetical protein | SAMN04488511_103130 | Not Available | Negative | 1220829 - 1221290 | 17630.2 |
| superoxide dismutase, fe-mn family | SAMN04488511_103131 | Not Available | Negative | 1221387 - 1221995 | 22500.5 |
| trna(adenine34) deaminase | SAMN04488511_103132 | Not Available | Negative | 1222269 - 1222736 | 17471.1 |
| pp_01013 | SAMN04488511_103133 | Not Available | Negative | 1222987 - 1223322 | Not Available |
| xylulokinase | SAMN04488511_103134 | Not Available | Positive | 1223509 - 1224993 | 53922.1 |
| d-xylose isomerase | SAMN04488511_103135 | Not Available | Positive | 1225068 - 1226399 | 49882.3 |
| solute:na+ symporter, sss family | SAMN04488511_103136 | Not Available | Positive | 1226660 - 1228327 | 60661.6 |
| hypothetical protein | SAMN04488511_103137 | Not Available | Negative | 1228766 - 1229149 | 14120.0 |
| lipoprotein-releasing system permease protein | SAMN04488511_103138 | Not Available | Negative | 1229151 - 1230464 | 48471.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
