Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter suwonensis |
| Strain | strain DSM 18130 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1755941 bp
Thymine Count
1751697 bp
Guanine Count
1139050 bp
Cytosine Count
1154468 bp
Genome Length
5803831 bp
Protein-coding Genes
4873 genes
Non-Coding Genes
59 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna polymerase i | SAMN04488511_103119 | Not Available | Negative | 1210436 - 1213243 | 104605.0 |
| caax protease self-immunity | SAMN04488511_103120 | Not Available | Negative | 1213339 - 1213902 | 22362.2 |
| hypothetical protein | SAMN04488511_103121 | Not Available | Positive | 1214094 - 1214774 | 24790.0 |
| dna-3-methyladenine glycosylase i | SAMN04488511_103122 | Not Available | Negative | 1214827 - 1215414 | 22545.1 |
| four helix bundle protein | SAMN04488511_103123 | Not Available | Negative | 1215416 - 1215778 | 13950.7 |
| alkylhydroperoxidase ahpd family core domain-containing protein | SAMN04488511_103124 | Not Available | Negative | 1215834 - 1216187 | 13307.9 |
| methylated-dna-protein-cysteine methyltransferase related protein | SAMN04488511_103125 | Not Available | Negative | 1216245 - 1216580 | 12475.2 |
| trna (guanine-n7-)-methyltransferase | SAMN04488511_103126 | Not Available | Negative | 1216580 - 1217230 | 25130.9 |
| gdp-l-fucose synthase | SAMN04488511_103127 | Not Available | Positive | 1217344 - 1218270 | 34899.8 |
| predicted glycosyl hydrolase, gh43/duf377 family | SAMN04488511_103128 | Not Available | Negative | 1218322 - 1219452 | 42466.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
