Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter suwonensis |
| Strain | strain DSM 18130 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1755941 bp
Thymine Count
1751697 bp
Guanine Count
1139050 bp
Cytosine Count
1154468 bp
Genome Length
5803831 bp
Protein-coding Genes
4873 genes
Non-Coding Genes
59 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| Decorating protein | SAMN04488511_1151 | Not Available | - | 4309297 - 4312169 | 94836.4 |
| Minor tail protein | SAMN04488511_1152 | Not Available | - | 4312346 - 4312966 | 21199.2 |
| Minor tail protein | SAMN04488511_1153 | Not Available | - | 4313000 - 4313617 | 21462.3 |
| Minor tail protein | SAMN04488511_1154 | Not Available | - | 4313642 - 4314247 | 20769.6 |
| Cyanobacterial phosphoribosylglycinamide formyltransferase | SAMN04488511_1155 | Not Available | - | 4314254 - 4315192 | 34559.8 |
| abc-type branched-chain amino acid transport system, substrate-binding protein | SAMN04488511_1156 | Not Available | - | 4315194 - 4316318 | 41008.4 |
| Piuc | SAMN04488511_1157 | Not Available | - | 4316328 - 4317044 | 27097.5 |
| Carbamoyltransferase | SAMN04488511_1158 | Not Available | + | 4317171 - 4318943 | 65961.4 |
| Hypothetical protein | SAMN04488511_1159 | Not Available | + | 4318940 - 4320136 | 45244.1 |
| phytanoyl-coa dioxygenase (phyh) | SAMN04488511_11510 | Not Available | + | 4320139 - 4321152 | 38776.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
