Pseudobutyrivibrio sp. C4

Gram-positive

Kingdom

Bacillati

Phylum

Bacillota

Class

Clostridia

Order

Lachnospirales

Family

Lachnospiraceae

Genus

Pseudobutyrivibrio

Description

Pseudobutyrivibrio sp. C4 is a Gram-positive bacterium characterized by the presence of flagella, which suggests it is motile. This motility may give it an advantage in its ecological niche by allowing it to navigate and colonize specific environments effectively. The organism has a single replicon, indicating a straightforward genomic structure that may facilitate efficient replication and adaptation. The accession number for Pseudobutyrivibrio sp. C4 is FOHF00000000.1, which provides a reference for researchers seeking to study its genetic and phenotypic characteristics further. The classification of this bacterium within the Pseudobutyrivibrio genus suggests it may play a role in the fermentation processes within its environment, particularly in anaerobic conditions where such microorganisms thrive. Understanding the traits of Pseudobutyrivibrio sp. C4 can contribute to insights into its potential ecological roles, particularly in relation to nutrient cycling and interactions with other microorganisms. As a motile, Gram-positive organism with a defined genomic structure, it may be involved in the breakdown of complex organic materials, thereby influencing the microbiome dynamics in its habitat. This could have implications for fields such as agriculture or environmental microbiology, where microbial activity is critical for soil health and ecosystem functioning.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassClostridia
OrderLachnospirales
FamilyLachnospiraceae
GenusPseudobutyrivibrio
SpeciesPseudobutyrivibrio sp. C4
StrainNo strain

Profile

Physiology
Gram staining propertiesPositive
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudobutyrivibrio sp. C4


Gene Summary

Adenine Count

899364 bp

Thymine Count

884652 bp

Guanine Count

583791 bp

Cytosine Count

551846 bp

Genome Length

2919653 bp

Protein-coding Genes

2668 genes

Non-Coding Genes

53 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
iron complex transport system atp-binding proteinSAMN02910413_0191Not AvailableNegative150 - 95629500.9
iron complex transport system permease proteinSAMN02910413_0192Not AvailableNegative956 - 194835290.6
iron complex transport system permease proteinSAMN02910413_0193Not AvailableNegative1945 - 294334781.7
iron complex transport system substrate-binding proteinSAMN02910413_0194Not AvailableNegative2936 - 399437949.0
arginyl-trna synthetaseSAMN02910413_0195Not AvailablePositive4202 - 596265326.4
16s rrna c967 or c1407 c5-methylase, rsmb/rsmf familySAMN02910413_0196Not AvailablePositive5962 - 729650192.5
uncharacterized membrane-anchored protein yitt, contains duf161 and duf2179 domainsSAMN02910413_0197Not AvailablePositive7286 - 815231699.4
small gtp-binding protein domain-containing proteinSAMN02910413_0198Not AvailablePositive8152 - 1071695191.3
diguanylate cyclase (ggdef) domain-containing proteinSAMN02910413_0199Not AvailablePositive10829 - 1298882999.2
cobalamin biosynthesis protein cbik, co2+ chelataseSAMN02910413_0200Not AvailablePositive13381 - 1497657382.8

Displaying genes 1 – 10 of 2114 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.