Pseudobutyrivibrio sp. C4

Gram-positive

Kingdom

Bacillati

Phylum

Bacillota

Class

Clostridia

Order

Lachnospirales

Family

Lachnospiraceae

Genus

Pseudobutyrivibrio

Description

Pseudobutyrivibrio sp. C4 is a Gram-positive bacterium characterized by the presence of flagella, which suggests it is motile. This motility may give it an advantage in its ecological niche by allowing it to navigate and colonize specific environments effectively. The organism has a single replicon, indicating a straightforward genomic structure that may facilitate efficient replication and adaptation. The accession number for Pseudobutyrivibrio sp. C4 is FOHF00000000.1, which provides a reference for researchers seeking to study its genetic and phenotypic characteristics further. The classification of this bacterium within the Pseudobutyrivibrio genus suggests it may play a role in the fermentation processes within its environment, particularly in anaerobic conditions where such microorganisms thrive. Understanding the traits of Pseudobutyrivibrio sp. C4 can contribute to insights into its potential ecological roles, particularly in relation to nutrient cycling and interactions with other microorganisms. As a motile, Gram-positive organism with a defined genomic structure, it may be involved in the breakdown of complex organic materials, thereby influencing the microbiome dynamics in its habitat. This could have implications for fields such as agriculture or environmental microbiology, where microbial activity is critical for soil health and ecosystem functioning.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassClostridia
OrderLachnospirales
FamilyLachnospiraceae
GenusPseudobutyrivibrio
SpeciesPseudobutyrivibrio sp. C4
StrainNo strain

Profile

Physiology
Gram staining propertiesPositive
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudobutyrivibrio sp. C4 genome assembly, contig:

Gene Summary

Adenine Count

899364 bp

Thymine Count

884652 bp

Guanine Count

583791 bp

Cytosine Count

551846 bp

Genome Length

2919653 bp

Protein-coding Genes

2668 genes

Non-Coding Genes

53 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
3-deoxy-d-arabinoheptulosonate-7-phosphate synthaseSAMN02910413_0252Not AvailableNegative74740 - 7577138810.2
shikimate dehydrogenaseSAMN02910413_0253Not AvailableNegative75796 - 7665030849.2
Trna-argNot AvailableNot AvailablePositive76779 - 76852Not Available
sh3 domain-containing proteinSAMN02910413_0255Not AvailablePositive76888 - 7815346084.6
23s rrna pseudouridine2604 synthaseSAMN02910413_0256Not AvailablePositive78229 - 7895127372.2
dna ligase (nad+)SAMN02910413_0257Not AvailablePositive78969 - 8097273776.9
diguanylate cyclase (ggdef) domain-containing proteinSAMN02910413_0258Not AvailablePositive81025 - 8274065477.4
diguanylate cyclase (ggdef) domain-containing proteinSAMN02910413_0259Not AvailablePositive82733 - 8441263637.0
homoserine o-succinyltransferaseSAMN02910413_0260Not AvailablePositive84481 - 8540435934.5
hypothetical proteinSAMN02910413_0261Not AvailablePositive85576 - 8610320826.5

Displaying genes 61 – 70 of 2114 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.