Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Pseudobutyrivibrio
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Pseudobutyrivibrio |
| Species | Pseudobutyrivibrio sp. C4 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
899364 bp
Thymine Count
884652 bp
Guanine Count
583791 bp
Cytosine Count
551846 bp
Genome Length
2919653 bp
Protein-coding Genes
2668 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 3-deoxy-d-arabinoheptulosonate-7-phosphate synthase | SAMN02910413_0252 | Not Available | Negative | 74740 - 75771 | 38810.2 |
| shikimate dehydrogenase | SAMN02910413_0253 | Not Available | Negative | 75796 - 76650 | 30849.2 |
| Trna-arg | Not Available | Not Available | Positive | 76779 - 76852 | Not Available |
| sh3 domain-containing protein | SAMN02910413_0255 | Not Available | Positive | 76888 - 78153 | 46084.6 |
| 23s rrna pseudouridine2604 synthase | SAMN02910413_0256 | Not Available | Positive | 78229 - 78951 | 27372.2 |
| dna ligase (nad+) | SAMN02910413_0257 | Not Available | Positive | 78969 - 80972 | 73776.9 |
| diguanylate cyclase (ggdef) domain-containing protein | SAMN02910413_0258 | Not Available | Positive | 81025 - 82740 | 65477.4 |
| diguanylate cyclase (ggdef) domain-containing protein | SAMN02910413_0259 | Not Available | Positive | 82733 - 84412 | 63637.0 |
| homoserine o-succinyltransferase | SAMN02910413_0260 | Not Available | Positive | 84481 - 85404 | 35934.5 |
| hypothetical protein | SAMN02910413_0261 | Not Available | Positive | 85576 - 86103 | 20826.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
