Roseivivax roseus strain DSM 23042

rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Rhodobacterales

Family

Roseobacteraceae

Genus

Tranquillimonas

Description

Roseivivax roseus strain DSM 23042 is a Gram-negative, rod-shaped bacterium. It is characterized by having a single replicon, which is indicative of its genetic organization. The strain is cataloged under the accession number FOGU00000000.1, providing a reference point for genomic studies and further research. As a member of the Roseivivax genus, which is known for its phototrophic properties, R. roseus may play a role in various ecological environments, particularly in aquatic systems where light is available for photosynthesis. The Gram-negative nature of this bacterium suggests that it possesses a distinctive outer membrane, which can contribute to its adaptability and survival in diverse habitats. Understanding the characteristics of R. roseus can provide insights into its ecological roles, such as its potential contributions to nutrient cycling and its interactions within microbial communities. The study of this strain may also shed light on the metabolic pathways utilized by phototrophic bacteria, thereby enhancing our knowledge of microbial ecology and the functioning of ecosystems where such bacteria thrive.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderRhodobacterales
FamilyRoseobacteraceae
GenusTranquillimonas
SpeciesTranquillimonas rosea
StrainNo strain

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Roseivivax roseus strain DSM 23042


Gene Summary

Adenine Count

681804 bp

Thymine Count

681499 bp

Guanine Count

1436977 bp

Cytosine Count

1432810 bp

Genome Length

4233461 bp

Protein-coding Genes

4064 genes

Non-Coding Genes

73 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
Major capsid proteinSAMN04490244_101271Not AvailableNegative282336 - 28337338589.7
Head decoration protein dSAMN04490244_101272Not AvailableNegative283441 - 28382112735.8
Capsid componentSAMN04490244_101273Not AvailableNegative283882 - 28532449074.0
Portal proteinSAMN04490244_101274Not AvailableNegative285329 - 28693659794.5
Head-tail joining proteinSAMN04490244_101275Not AvailableNegative286936 - 2871547822.24
Terminase large subunitSAMN04490244_101276Not AvailableNegative287147 - 28917775595.9
Putative transketolase central region-containing proteinSAMN04490244_10498Not AvailablePositive1595286 - 159626333692.1
pyruvate dehydrogenase e1 component beta subunitSAMN04490244_10499Not AvailablePositive1596260 - 159753143235.7
Serine acetyltransferaseSAMN04490244_104100Not AvailableNegative1597539 - 159834828919.8
transcriptional regulator, trar/dksa familySAMN04490244_104101Not AvailablePositive1598416 - 159875412699.9

Displaying genes 1 – 10 of 4137 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.