Flavobacterium frigoris strain DSM 15719

Rod

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Flavobacteriia

Order

Flavobacteriales

Family

Flavobacteriaceae

Genus

Flavobacterium

Description

Flavobacterium frigoris strain DSM 15719 is characterized as a rod-shaped bacterium that possesses flagella, indicating its capability for motility. This strain is notable for having a single replicon, which is a feature that can influence its genetic stability and replication processes. The strain is cataloged under the accession number FOFZ00000000.1, providing a reference for researchers seeking to access its genomic information. The presence of flagella in Flavobacterium frigoris suggests adaptations to its environment, allowing it to navigate through aquatic habitats where it is likely found. Members of the Flavobacterium genus are often associated with cold environments, which aligns with the name "frigoris," meaning cold, and indicates that this strain may thrive in polar or temperate aquatic ecosystems. The ecological role of Flavobacterium frigoris may include participation in the degradation of organic matter in cold water environments, contributing to nutrient cycling and energy flow in these ecosystems. By breaking down complex organic materials, this bacterium could play a vital role in maintaining the health of its habitat, supporting the growth of other microorganisms and influencing the overall biodiversity of its ecological community. This characteristic highlights the importance of understanding microbial life in extreme environments and its implications for ecosystem dynamics.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassFlavobacteriia
OrderFlavobacteriales
FamilyFlavobacteriaceae
GenusFlavobacterium
SpeciesFlavobacterium frigoris
Strainstrain DSM 15719

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Flavobacterium frigoris strain DSM 15719
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Flavobacterium frigoris strain DSM 15719 genome assembly, contig:

Gene Summary

Adenine Count

1343648 bp

Thymine Count

1317872 bp

Guanine Count

678804 bp

Cytosine Count

705257 bp

Genome Length

4045707 bp

Protein-coding Genes

3533 genes

Non-Coding Genes

83 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
signal peptidase iiSAMN05444355_101366Not AvailablePositive410792 - 41139122665.7
hypothetical proteinSAMN05444355_101367Not AvailableNegative411445 - 4116427288.0
5-formyltetrahydrofolate cyclo-ligaseSAMN05444355_101368Not AvailableNegative411679 - 41224822001.7
l-histidine carboxy-lyase (histamine-forming)SAMN05444355_101369Not AvailableNegative412217 - 41347947880.7
hypothetical proteinSAMN05444355_101370Not AvailableNegative413536 - 41450435495.2
excinuclease abc subunit cSAMN05444355_101371Not AvailablePositive414643 - 41644268789.7
nte family proteinSAMN05444355_101372Not AvailablePositive416492 - 41870283262.3
homogentisate 1,2-dioxygenaseSAMN05444355_101373Not AvailablePositive418993 - 42015044351.9
4-hydroxyphenylpyruvate dioxygenaseSAMN05444355_101375Not AvailablePositive420258 - 42150247153.4
protein of unknown functionSAMN05444355_101376Not AvailablePositive421718 - 42256332423.9

Displaying genes 411 – 420 of 3616 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.