Flavobacterium frigoris strain DSM 15719

Rod

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Flavobacteriia

Order

Flavobacteriales

Family

Flavobacteriaceae

Genus

Flavobacterium

Description

Flavobacterium frigoris strain DSM 15719 is characterized as a rod-shaped bacterium that possesses flagella, indicating its capability for motility. This strain is notable for having a single replicon, which is a feature that can influence its genetic stability and replication processes. The strain is cataloged under the accession number FOFZ00000000.1, providing a reference for researchers seeking to access its genomic information. The presence of flagella in Flavobacterium frigoris suggests adaptations to its environment, allowing it to navigate through aquatic habitats where it is likely found. Members of the Flavobacterium genus are often associated with cold environments, which aligns with the name "frigoris," meaning cold, and indicates that this strain may thrive in polar or temperate aquatic ecosystems. The ecological role of Flavobacterium frigoris may include participation in the degradation of organic matter in cold water environments, contributing to nutrient cycling and energy flow in these ecosystems. By breaking down complex organic materials, this bacterium could play a vital role in maintaining the health of its habitat, supporting the growth of other microorganisms and influencing the overall biodiversity of its ecological community. This characteristic highlights the importance of understanding microbial life in extreme environments and its implications for ecosystem dynamics.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassFlavobacteriia
OrderFlavobacteriales
FamilyFlavobacteriaceae
GenusFlavobacterium
SpeciesFlavobacterium frigoris
Strainstrain DSM 15719

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Flavobacterium frigoris strain DSM 15719
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Flavobacterium frigoris strain DSM 15719 genome assembly, contig:

Gene Summary

Adenine Count

1343648 bp

Thymine Count

1317872 bp

Guanine Count

678804 bp

Cytosine Count

705257 bp

Genome Length

4045707 bp

Protein-coding Genes

3533 genes

Non-Coding Genes

83 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
periplasmic chaperone for outer membrane proteins skpSAMN05444355_102357Not AvailablePositive1087345 - 108835239026.0
periplasmic chaperone for outer membrane proteins skpSAMN05444355_102358Not AvailablePositive1088378 - 108887818493.4
glutamate racemaseSAMN05444355_102359Not AvailablePositive1088991 - 108976728684.0
carbonic anhydrase or acetyltransferase, isoleucine patch superfamilySAMN05444355_102360Not AvailableNegative1089778 - 109029318462.1
type ix secretion system membrane protein, porp/sprf familySAMN05444355_102361Not AvailableNegative1090313 - 109131137812.6
fe-s cluster biogenesis protein nfua, 4fe-4s-binding domainSAMN05444355_102362Not AvailablePositive1091470 - 109236933854.2
hypothetical proteinSAMN05444355_102363Not AvailablePositive1092496 - 10926967239.76
hypothetical proteinSAMN05444355_102364Not AvailablePositive1092921 - 109335515772.2
small conductance mechanosensitive channelSAMN05444355_102365Not AvailablePositive1093379 - 109426032674.3
trna threonylcarbamoyladenosine biosynthesis protein tsabSAMN05444355_102366Not AvailableNegative1094270 - 109493824607.6

Displaying genes 1021 – 1030 of 3616 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.