Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Parapedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Parapedobacter |
| Species | Parapedobacter koreensis |
| Strain | strain Jip14 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1434869 bp
Thymine Count
1436882 bp
Guanine Count
1328537 bp
Cytosine Count
1347468 bp
Genome Length
5547756 bp
Protein-coding Genes
4830 genes
Non-Coding Genes
46 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rna polymerase sigma-70 factor, ecf subfamily | SAMN05421740_1018 | Not Available | Negative | 7456 - 7932 | 18172.8 |
| cubico group peptidase, beta-lactamase class c family | SAMN05421740_1019 | Not Available | Negative | 7937 - 9310 | 50394.6 |
| hypothetical protein | SAMN05421740_10110 | Not Available | Negative | 9435 - 9713 | 10635.8 |
| cell wall-associated hydrolase, nlpc family | SAMN05421740_10111 | Not Available | Positive | 10189 - 10692 | 18163.0 |
| hypothetical protein | SAMN05421740_10112 | Not Available | Positive | 10925 - 11107 | 6617.21 |
| hypothetical protein | SAMN05421740_10113 | Not Available | Positive | 11324 - 12265 | 32261.1 |
| y_y_y domain-containing protein | SAMN05421740_10114 | Not Available | Positive | 12369 - 15365 | 115508.0 |
| two component transcriptional regulator, lyttr family | SAMN05421740_10115 | Not Available | Positive | 15355 - 16083 | 27885.8 |
| hypothetical protein | SAMN05421740_10116 | Not Available | Negative | 16107 - 16334 | 8304.19 |
| hypothetical protein | SAMN05421740_10117 | Not Available | Positive | 16806 - 16943 | 5221.35 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
