Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Parapedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Parapedobacter |
| Species | Parapedobacter koreensis |
| Strain | strain Jip14 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1434869 bp
Thymine Count
1436882 bp
Guanine Count
1328537 bp
Cytosine Count
1347468 bp
Genome Length
5547756 bp
Protein-coding Genes
4830 genes
Non-Coding Genes
46 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein of unknown function | SAMN05421740_102153 | Not Available | Positive | 1114699 - 1115943 | 47484.8 |
| response regulator receiver domain-containing protein | SAMN05421740_102154 | Not Available | Negative | 1115971 - 1116402 | 15907.0 |
| protein of unknown function | SAMN05421740_102155 | Not Available | Negative | 1116736 - 1117182 | 17394.8 |
| conjugative transposon protein trao | SAMN05421740_102156 | Not Available | Negative | 1117195 - 1117752 | 20802.1 |
| bacteroides conjugative transposon tran protein | SAMN05421740_102157 | Not Available | Negative | 1117770 - 1118672 | 34074.0 |
| bacteroides conjugative transposon tram protein | SAMN05421740_102158 | Not Available | Negative | 1118774 - 1120099 | 48617.0 |
| hypothetical protein | SAMN05421740_102159 | Not Available | Negative | 1120086 - 1120373 | 11104.5 |
| hypothetical protein | SAMN05421740_102160 | Not Available | Negative | 1120387 - 1120806 | 15510.8 |
| bacteroides conjugative transposon trak protein | SAMN05421740_102161 | Not Available | Negative | 1120817 - 1121440 | 24067.8 |
| bacteroides conjugative transposon traj protein | SAMN05421740_102162 | Not Available | Negative | 1121454 - 1122449 | 36730.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
