Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Parapedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Parapedobacter |
| Species | Parapedobacter koreensis |
| Strain | strain Jip14 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1434869 bp
Thymine Count
1436882 bp
Guanine Count
1328537 bp
Cytosine Count
1347468 bp
Genome Length
5547756 bp
Protein-coding Genes
4830 genes
Non-Coding Genes
46 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 4-amino-4-deoxy-l-arabinose transferase | SAMN05421740_102143 | Not Available | Positive | 1106679 - 1108325 | 61149.0 |
| Trna-ser | Not Available | Not Available | Positive | 1108433 - 1108522 | Not Available |
| doxx-like family protein | SAMN05421740_102145 | Not Available | Negative | 1108658 - 1109038 | 13978.5 |
| transcriptional regulator, hxlr family | SAMN05421740_102146 | Not Available | Positive | 1109182 - 1109562 | 14520.6 |
| Trna-lys | Not Available | Not Available | Positive | 1109659 - 1109734 | Not Available |
| hypothetical protein | SAMN05421740_102148 | Not Available | Negative | 1111289 - 1111450 | 6078.47 |
| hypothetical protein | SAMN05421740_102149 | Not Available | Positive | 1111806 - 1112033 | 8669.48 |
| antirestriction protein | SAMN05421740_102150 | Not Available | Positive | 1112014 - 1112646 | 24830.3 |
| hypothetical protein | SAMN05421740_102151 | Not Available | Negative | 1112932 - 1113078 | 5354.72 |
| reverse transcriptase (rna-dependent dna polymerase) | SAMN05421740_102152 | Not Available | Positive | 1113238 - 1114671 | 56601.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
