Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Parapedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Parapedobacter |
| Species | Parapedobacter koreensis |
| Strain | strain Jip14 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1434869 bp
Thymine Count
1436882 bp
Guanine Count
1328537 bp
Cytosine Count
1347468 bp
Genome Length
5547756 bp
Protein-coding Genes
4830 genes
Non-Coding Genes
46 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fecr family protein | SAMN05421740_102123 | Not Available | Negative | 1085702 - 1086742 | 39066.9 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN05421740_102124 | Not Available | Negative | 1086810 - 1087472 | 25588.9 |
| glucose/arabinose dehydrogenase, beta-propeller fold | SAMN05421740_102125 | Not Available | Positive | 1087583 - 1088731 | 42660.5 |
| de-hypoxanthine futalosine cyclase | SAMN05421740_102126 | Not Available | Positive | 1088790 - 1089914 | 42398.0 |
| condensin subunit scpb | SAMN05421740_102127 | Not Available | Positive | 1089930 - 1090487 | 20940.2 |
| hypothetical protein | SAMN05421740_102128 | Not Available | Positive | 1090600 - 1090788 | 7191.59 |
| helix-turn-helix domain-containing protein | SAMN05421740_102129 | Not Available | Negative | 1090988 - 1091326 | 12875.6 |
| udp-n-acetylmuramate: l-alanyl-gamma-d-glutamyl-meso-diaminopimelate ligase | SAMN05421740_102130 | Not Available | Negative | 1091403 - 1092761 | 51510.8 |
| ribosomal protein l11 methyltransferase | SAMN05421740_102131 | Not Available | Negative | 1092764 - 1093606 | 31216.3 |
| triosephosphate isomerase | SAMN05421740_102132 | Not Available | Negative | 1093627 - 1094394 | 27945.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
