Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Parapedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Parapedobacter |
| Species | Parapedobacter koreensis |
| Strain | strain Jip14 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1434869 bp
Thymine Count
1436882 bp
Guanine Count
1328537 bp
Cytosine Count
1347468 bp
Genome Length
5547756 bp
Protein-coding Genes
4830 genes
Non-Coding Genes
46 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycerophosphoryl diester phosphodiesterase | SAMN05421740_102113 | Not Available | Positive | 1071093 - 1072037 | 34753.6 |
| abc-2 type transport system atp-binding protein | SAMN05421740_102114 | Not Available | Positive | 1072045 - 1072758 | 25956.7 |
| hypothetical protein | SAMN05421740_102115 | Not Available | Positive | 1072850 - 1073425 | 19558.0 |
| protein involved in gliding motility gldg | SAMN05421740_102116 | Not Available | Positive | 1073531 - 1075945 | 88626.7 |
| sugar phosphate isomerase/epimerase | SAMN05421740_102117 | Not Available | Negative | 1075937 - 1076839 | 33072.4 |
| l-lactate dehydrogenase complex protein llde | SAMN05421740_102118 | Not Available | Negative | 1076882 - 1077610 | 27284.7 |
| mfs transporter, umf1 family | SAMN05421740_102119 | Not Available | Negative | 1077600 - 1078910 | 48848.7 |
| sugar phosphate isomerase/epimerase | SAMN05421740_102120 | Not Available | Negative | 1079048 - 1080007 | 35186.3 |
| starch-binding associating with outer membrane | SAMN05421740_102121 | Not Available | Negative | 1080047 - 1081762 | 62859.8 |
| tonb-linked outer membrane protein, susc/raga family | SAMN05421740_102122 | Not Available | Negative | 1081782 - 1085321 | 130135.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
