Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Parapedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Parapedobacter |
| Species | Parapedobacter koreensis |
| Strain | strain Jip14 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1434869 bp
Thymine Count
1436882 bp
Guanine Count
1328537 bp
Cytosine Count
1347468 bp
Genome Length
5547756 bp
Protein-coding Genes
4830 genes
Non-Coding Genes
46 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| osmotically-inducible protein osmy, contains bon domain | SAMN05421740_102103 | Not Available | Negative | 1064291 - 1064929 | 23428.9 |
| putative dna-binding domain-containing protein | SAMN05421740_102104 | Not Available | Positive | 1065272 - 1065895 | 23777.5 |
| hypothetical protein | SAMN05421740_102105 | Not Available | Positive | 1065961 - 1066404 | 16470.6 |
| protein sco1/2 | SAMN05421740_102106 | Not Available | Positive | 1066414 - 1067052 | 24272.9 |
| cytochrome c oxidase, cbb3-type, subunit iii | SAMN05421740_102107 | Not Available | Positive | 1067049 - 1067477 | 15444.6 |
| protein of unknown function | SAMN05421740_102108 | Not Available | Negative | 1067487 - 1067870 | 14389.4 |
| hypothetical protein | SAMN05421740_102109 | Not Available | Negative | 1067848 - 1068642 | 29504.4 |
| protein of unknown function | SAMN05421740_102110 | Not Available | Positive | 1068745 - 1069293 | 20909.2 |
| doxx protein | SAMN05421740_102111 | Not Available | Positive | 1069306 - 1070490 | 44534.0 |
| shikimate kinase | SAMN05421740_102112 | Not Available | Positive | 1070521 - 1071033 | 18882.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
