Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Parapedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Parapedobacter |
| Species | Parapedobacter koreensis |
| Strain | strain Jip14 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1434869 bp
Thymine Count
1436882 bp
Guanine Count
1328537 bp
Cytosine Count
1347468 bp
Genome Length
5547756 bp
Protein-coding Genes
4830 genes
Non-Coding Genes
46 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein of unknown function | SAMN05421740_10293 | Not Available | Positive | 1056294 - 1057058 | 28670.5 |
| lysm repeat-containing protein | SAMN05421740_10294 | Not Available | Positive | 1057077 - 1058009 | 33401.1 |
| uridine kinase | SAMN05421740_10295 | Not Available | Positive | 1057993 - 1058634 | 24616.3 |
| 3-oxoacid coa-transferase subunit b | SAMN05421740_10296 | Not Available | Negative | 1058631 - 1059290 | 23403.7 |
| 3-oxoacid coa-transferase subunit a | SAMN05421740_10297 | Not Available | Negative | 1059280 - 1060017 | 26631.4 |
| hypothetical protein | SAMN05421740_10298 | Not Available | Positive | 1060169 - 1060342 | 6548.11 |
| major facilitator superfamily protein | SAMN05421740_10299 | Not Available | Negative | 1060339 - 1061577 | 44999.8 |
| hypothetical protein | SAMN05421740_102100 | Not Available | Positive | 1061705 - 1062181 | 18464.0 |
| nucleotide-binding universal stress protein, uspa family | SAMN05421740_102101 | Not Available | Negative | 1062194 - 1063039 | 31803.4 |
| nucleotide-binding universal stress protein, uspa family | SAMN05421740_102102 | Not Available | Negative | 1063134 - 1063970 | 30688.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
