Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Parapedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Parapedobacter |
| Species | Parapedobacter koreensis |
| Strain | strain Jip14 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1434869 bp
Thymine Count
1436882 bp
Guanine Count
1328537 bp
Cytosine Count
1347468 bp
Genome Length
5547756 bp
Protein-coding Genes
4830 genes
Non-Coding Genes
46 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lactate dehydrogenase | SAMN05421740_10283 | Not Available | Positive | 1045351 - 1046328 | 36014.5 |
| thiol-disulfide isomerase or thioredoxin | SAMN05421740_10284 | Not Available | Negative | 1046350 - 1046949 | 22134.8 |
| tigr02757 family protein | SAMN05421740_10285 | Not Available | Negative | 1047000 - 1047866 | 33204.9 |
| cystathionine gamma-lyase | SAMN05421740_10286 | Not Available | Negative | 1047866 - 1049011 | 41847.3 |
| nucleoside-diphosphate-sugar epimerase | SAMN05421740_10287 | Not Available | Negative | 1049035 - 1049823 | 28788.5 |
| prolyl-trna synthetase | SAMN05421740_10288 | Not Available | Negative | 1049841 - 1051313 | 55327.9 |
| hypothetical protein | SAMN05421740_10289 | Not Available | Positive | 1051497 - 1052657 | 41496.7 |
| hypothetical protein | SAMN05421740_10290 | Not Available | Positive | 1052790 - 1054310 | 55653.0 |
| starvation-inducible dna-binding protein | SAMN05421740_10291 | Not Available | Negative | 1054371 - 1054850 | 18264.9 |
| membrane-bound serine protease (clpp class) | SAMN05421740_10292 | Not Available | Negative | 1054910 - 1056268 | 48689.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
