Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Parapedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Parapedobacter |
| Species | Parapedobacter koreensis |
| Strain | strain Jip14 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1434869 bp
Thymine Count
1436882 bp
Guanine Count
1328537 bp
Cytosine Count
1347468 bp
Genome Length
5547756 bp
Protein-coding Genes
4830 genes
Non-Coding Genes
46 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycerol-3-phosphate acyltransferase plsy | SAMN05421740_10273 | Not Available | Negative | 1034418 - 1035062 | 23088.9 |
| nicotinate-nucleotide pyrophosphorylase | SAMN05421740_10274 | Not Available | Negative | 1035109 - 1035969 | 31152.6 |
| protein of unknown function | SAMN05421740_10275 | Not Available | Negative | 1036114 - 1036467 | 13337.6 |
| phosphoglycerate mutase | SAMN05421740_10276 | Not Available | Positive | 1036622 - 1038286 | 60709.3 |
| hypothetical protein | SAMN05421740_10277 | Not Available | Positive | 1038291 - 1038845 | 21229.8 |
| tetratricopeptide repeat-containing protein | SAMN05421740_10278 | Not Available | Negative | 1038911 - 1039648 | 27481.2 |
| atp-dependent lon protease | SAMN05421740_10279 | Not Available | Positive | 1040004 - 1042463 | 91986.6 |
| putative hemolysin | SAMN05421740_10280 | Not Available | Positive | 1042518 - 1043807 | 47295.6 |
| chromate reductase | SAMN05421740_10281 | Not Available | Positive | 1043862 - 1044419 | 20543.4 |
| orotidine-5'-phosphate decarboxylase | SAMN05421740_10282 | Not Available | Negative | 1044436 - 1045269 | 30200.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
