Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Parapedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Parapedobacter |
| Species | Parapedobacter koreensis |
| Strain | strain Jip14 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1434869 bp
Thymine Count
1436882 bp
Guanine Count
1328537 bp
Cytosine Count
1347468 bp
Genome Length
5547756 bp
Protein-coding Genes
4830 genes
Non-Coding Genes
46 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| excinuclease abc subunit c | SAMN05421740_10178 | Not Available | Negative | 91277 - 93085 | 69529.3 |
| penicillin-binding protein 1a | SAMN05421740_10179 | Not Available | Negative | 93112 - 95358 | 84973.5 |
| hypothetical protein | SAMN05421740_10180 | Not Available | Negative | 95383 - 98250 | 109129.0 |
| peptidase family m23 | SAMN05421740_10181 | Not Available | Positive | 98270 - 99286 | 37176.6 |
| polymer-forming protein | SAMN05421740_10182 | Not Available | Positive | 99316 - 99747 | 15372.3 |
| putative f0f1-atpase subunit ca2+/mg2+ transporter | SAMN05421740_10183 | Not Available | Positive | 99719 - 99946 | 8525.44 |
| hypothetical protein | SAMN05421740_10184 | Not Available | Negative | 100026 - 101003 | 36330.5 |
| ycei-like domain-containing protein | SAMN05421740_10185 | Not Available | Negative | 101016 - 101528 | 18973.6 |
| hypothetical protein | SAMN05421740_10186 | Not Available | Negative | 101588 - 101962 | 13171.6 |
| secreted repeat of unknown function | SAMN05421740_10187 | Not Available | Negative | 102020 - 102862 | 30023.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
