Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Parapedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Parapedobacter |
| Species | Parapedobacter koreensis |
| Strain | strain Jip14 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1434869 bp
Thymine Count
1436882 bp
Guanine Count
1328537 bp
Cytosine Count
1347468 bp
Genome Length
5547756 bp
Protein-coding Genes
4830 genes
Non-Coding Genes
46 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05421740_10263 | Not Available | Positive | 1025948 - 1026994 | 38658.9 |
| hypothetical protein | SAMN05421740_10264 | Not Available | Positive | 1027037 - 1027240 | 7791.74 |
| cell division transport system atp-binding protein | SAMN05421740_10265 | Not Available | Positive | 1027245 - 1027925 | 25126.0 |
| molecular chaperone grpe | SAMN05421740_10266 | Not Available | Positive | 1028022 - 1028612 | 21673.7 |
| molecular chaperone dnaj | SAMN05421740_10267 | Not Available | Positive | 1028626 - 1029771 | 41482.3 |
| outer membrane protein beta-barrel domain-containing protein | SAMN05421740_10268 | Not Available | Positive | 1030172 - 1030768 | 21200.9 |
| nadh dehydrogenase subunit d | SAMN05421740_10269 | Not Available | Negative | 1031048 - 1032259 | 45537.4 |
| nadh dehydrogenase subunit c | SAMN05421740_10270 | Not Available | Negative | 1032307 - 1032807 | 18832.6 |
| pyridoxamine 5'-phosphate oxidase | SAMN05421740_10271 | Not Available | Negative | 1032820 - 1033473 | 24818.4 |
| peptidase family m48 | SAMN05421740_10272 | Not Available | Negative | 1033524 - 1034336 | 29430.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
