Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Parapedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Parapedobacter |
| Species | Parapedobacter koreensis |
| Strain | strain Jip14 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1434869 bp
Thymine Count
1436882 bp
Guanine Count
1328537 bp
Cytosine Count
1347468 bp
Genome Length
5547756 bp
Protein-coding Genes
4830 genes
Non-Coding Genes
46 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| general secretion pathway protein e/type iv pilus assembly protein pilb | SAMN05421740_10243 | Not Available | Negative | 1007607 - 1009028 | 53359.3 |
| hypothetical protein | SAMN05421740_10244 | Not Available | Negative | 1009040 - 1009546 | 18926.3 |
| type ii secretion system protein g (gspg) | SAMN05421740_10245 | Not Available | Negative | 1009551 - 1009982 | 16248.7 |
| hypothetical protein | SAMN05421740_10246 | Not Available | Positive | 1010187 - 1011563 | 50778.2 |
| hypothetical protein | SAMN05421740_10247 | Not Available | Positive | 1011579 - 1011938 | 13258.4 |
| hypothetical protein | SAMN05421740_10248 | Not Available | Positive | 1011935 - 1012432 | 18558.1 |
| type iv pilus assembly protein pilc | SAMN05421740_10249 | Not Available | Positive | 1012429 - 1013592 | 43305.5 |
| hemoglobin | SAMN05421740_10250 | Not Available | Positive | 1013786 - 1014181 | 15258.4 |
| predicted dehydrogenase | SAMN05421740_10251 | Not Available | Positive | 1014462 - 1015580 | 40822.9 |
| transcriptional regulator, tetr family | SAMN05421740_10252 | Not Available | Positive | 1015728 - 1016375 | 25050.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
