Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Parapedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Parapedobacter |
| Species | Parapedobacter koreensis |
| Strain | strain Jip14 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1434869 bp
Thymine Count
1436882 bp
Guanine Count
1328537 bp
Cytosine Count
1347468 bp
Genome Length
5547756 bp
Protein-coding Genes
4830 genes
Non-Coding Genes
46 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| helix-turn-helix | SAMN05421740_10223 | Not Available | Positive | 989788 - 990060 | 10041.3 |
| conserved hypothetical protein (putative transposase or invertase) | SAMN05421740_10224 | Not Available | Negative | 990163 - 991056 | 34134.0 |
| hypothetical protein | SAMN05421740_10225 | Not Available | Positive | 991393 - 992046 | 25041.7 |
| hypothetical protein | SAMN05421740_10226 | Not Available | Positive | 992106 - 992372 | 9935.79 |
| hypothetical protein | SAMN05421740_10227 | Not Available | Positive | 992443 - 993498 | 40294.9 |
| hypothetical protein | SAMN05421740_10228 | Not Available | Negative | 993565 - 994662 | 42214.8 |
| hypothetical protein/trna(fmet)-specific endonuclease vapc | SAMN05421740_10229 | Not Available | Negative | 994711 - 995085 | 14137.4 |
| hypothetical protein | SAMN05421740_10230 | Not Available | Negative | 995079 - 995297 | 8159.75 |
| hypothetical protein | SAMN05421740_10231 | Not Available | Negative | 995439 - 995693 | 9773.01 |
| hypothetical protein | SAMN05421740_10232 | Not Available | Negative | 995873 - 996724 | 32049.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
