Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Parapedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Parapedobacter |
| Species | Parapedobacter koreensis |
| Strain | strain Jip14 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1434869 bp
Thymine Count
1436882 bp
Guanine Count
1328537 bp
Cytosine Count
1347468 bp
Genome Length
5547756 bp
Protein-coding Genes
4830 genes
Non-Coding Genes
46 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| two component transcriptional regulator, lyttr family | SAMN05421740_10213 | Not Available | Negative | 978566 - 979318 | 27653.1 |
| histidine kinase | SAMN05421740_10214 | Not Available | Negative | 979322 - 980398 | 41135.3 |
| lauroyl/myristoyl acyltransferase | SAMN05421740_10215 | Not Available | Negative | 980454 - 981530 | 40117.7 |
| hypothetical protein | SAMN05421740_10216 | Not Available | Negative | 981541 - 981681 | 5308.57 |
| hypothetical protein | SAMN05421740_10217 | Not Available | Negative | 981700 - 981807 | 3806.47 |
| camp-binding domain of crp or a regulatory subunit of camp-dependent protein kinases | SAMN05421740_10218 | Not Available | Positive | 982044 - 982616 | 22395.0 |
| hypothetical protein | SAMN05421740_10219 | Not Available | Positive | 982711 - 983082 | 13476.7 |
| susd family protein | SAMN05421740_10220 | Not Available | Negative | 983138 - 984490 | 51630.3 |
| tonb-linked outer membrane protein, susc/raga family | SAMN05421740_10221 | Not Available | Negative | 984514 - 987723 | 119112.0 |
| thiol-disulfide isomerase or thioredoxin | SAMN05421740_10222 | Not Available | Negative | 987757 - 989184 | 52301.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
