Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Parapedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Parapedobacter |
| Species | Parapedobacter koreensis |
| Strain | strain Jip14 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1434869 bp
Thymine Count
1436882 bp
Guanine Count
1328537 bp
Cytosine Count
1347468 bp
Genome Length
5547756 bp
Protein-coding Genes
4830 genes
Non-Coding Genes
46 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tonb-linked outer membrane protein, susc/raga family | SAMN05421740_101789 | Not Available | Negative | 938970 - 941975 | 110744.0 |
| y_y_y domain-containing protein | SAMN05421740_101790 | Not Available | Negative | 942312 - 945224 | 110012.0 |
| hypothetical protein | SAMN05421740_101791 | Not Available | Positive | 945402 - 945608 | 7912.63 |
| dna-binding protein, histone-like, putative | SAMN05421740_101792 | Not Available | Positive | 945823 - 946206 | 14008.8 |
| fecr family protein | SAMN05421740_101793 | Not Available | Negative | 946422 - 947762 | 49742.7 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN05421740_101794 | Not Available | Negative | 947759 - 948367 | 23451.3 |
| hypothetical protein | SAMN05421740_101795 | Not Available | Positive | 948678 - 949058 | 13318.5 |
| susd family protein | SAMN05421740_101796 | Not Available | Negative | 949123 - 950502 | 52127.7 |
| tonb-linked outer membrane protein, susc/raga family | SAMN05421740_101797 | Not Available | Negative | 950524 - 953730 | 118565.0 |
| hypothetical protein | SAMN05421740_101798 | Not Available | Negative | 953760 - 955439 | 63194.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
