Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Parapedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Parapedobacter |
| Species | Parapedobacter koreensis |
| Strain | strain Jip14 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1434869 bp
Thymine Count
1436882 bp
Guanine Count
1328537 bp
Cytosine Count
1347468 bp
Genome Length
5547756 bp
Protein-coding Genes
4830 genes
Non-Coding Genes
46 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| starch-binding associating with outer membrane | SAMN05421740_10168 | Not Available | Negative | 80276 - 81739 | 54804.0 |
| tonb-linked outer membrane protein, susc/raga family | SAMN05421740_10169 | Not Available | Negative | 81753 - 84908 | 117579.0 |
| transcriptional regulator, tetr family | SAMN05421740_10170 | Not Available | Positive | 85183 - 85806 | 24289.5 |
| hypothetical protein | SAMN05421740_10171 | Not Available | Negative | 85762 - 86046 | 10468.0 |
| polyisoprenoid-binding protein ycei | SAMN05421740_10172 | Not Available | Negative | 86063 - 86662 | 21166.2 |
| potassium/proton antiporter regulatory subunit, cpa2 family | SAMN05421740_10173 | Not Available | Positive | 86871 - 87347 | 17386.9 |
| potassium/proton antiporter membrane subunit, cpa2 family | SAMN05421740_10174 | Not Available | Positive | 87373 - 88611 | 44598.1 |
| hypothetical protein | SAMN05421740_10175 | Not Available | Positive | 88750 - 89355 | 22129.3 |
| fes assembly suf system protein | SAMN05421740_10176 | Not Available | Negative | 89376 - 89699 | 11648.3 |
| nad(p)h-hydrate epimerase | SAMN05421740_10177 | Not Available | Positive | 89818 - 91308 | 53906.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
