Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Parapedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Parapedobacter |
| Species | Parapedobacter koreensis |
| Strain | strain Jip14 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1434869 bp
Thymine Count
1436882 bp
Guanine Count
1328537 bp
Cytosine Count
1347468 bp
Genome Length
5547756 bp
Protein-coding Genes
4830 genes
Non-Coding Genes
46 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| camp-binding domain of crp or a regulatory subunit of camp-dependent protein kinases | SAMN05421740_101779 | Not Available | Negative | 926843 - 927430 | 22946.9 |
| glyoxalase family protein | SAMN05421740_101780 | Not Available | Positive | 927518 - 928501 | 37366.3 |
| phospholipase/carboxylesterase | SAMN05421740_101781 | Not Available | Positive | 928507 - 929130 | 22412.8 |
| hypothetical protein | SAMN05421740_101782 | Not Available | Positive | 929149 - 929457 | 11518.0 |
| beta-glucosidase | SAMN05421740_101783 | Not Available | Negative | 929476 - 931770 | 83431.8 |
| f5/8 type c domain-containing protein | SAMN05421740_101784 | Not Available | Negative | 931773 - 933512 | 65747.4 |
| hypothetical protein | SAMN05421740_101785 | Not Available | Negative | 933546 - 934901 | 50860.9 |
| hypothetical protein | SAMN05421740_101786 | Not Available | Negative | 934927 - 936573 | 60548.0 |
| concanavalin a-like lectin/glucanases superfamily protein | SAMN05421740_101787 | Not Available | Negative | 936589 - 937419 | 30406.8 |
| starch-binding associating with outer membrane | SAMN05421740_101788 | Not Available | Negative | 937442 - 938956 | 56226.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
