Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Parapedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Parapedobacter |
| Species | Parapedobacter koreensis |
| Strain | strain Jip14 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1434869 bp
Thymine Count
1436882 bp
Guanine Count
1328537 bp
Cytosine Count
1347468 bp
Genome Length
5547756 bp
Protein-coding Genes
4830 genes
Non-Coding Genes
46 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| na+/proline symporter | SAMN05421740_101769 | Not Available | Negative | 910895 - 912394 | 55606.0 |
| n-acetylmuramic acid 6-phosphate etherase | SAMN05421740_101770 | Not Available | Negative | 912400 - 913221 | 28996.9 |
| uncharacterized conserved protein ybbc, duf1343 family | SAMN05421740_101771 | Not Available | Negative | 913314 - 914543 | 45896.2 |
| galactokinase | SAMN05421740_101772 | Not Available | Positive | 914750 - 915925 | 43194.3 |
| aldose 1-epimerase | SAMN05421740_101773 | Not Available | Positive | 915951 - 917024 | 39777.8 |
| signal transduction histidine kinase | SAMN05421740_101774 | Not Available | Positive | 917035 - 918183 | 42974.0 |
| signal transduction histidine kinase | SAMN05421740_101775 | Not Available | Positive | 918185 - 921745 | 132502.0 |
| response regulator receiver domain-containing protein | SAMN05421740_101776 | Not Available | Positive | 921759 - 922145 | 14223.6 |
| argininosuccinate lyase | SAMN05421740_101777 | Not Available | Negative | 922146 - 923477 | 49783.1 |
| dipeptidyl aminopeptidase/acylaminoacyl peptidase | SAMN05421740_101778 | Not Available | Positive | 923624 - 926491 | 106233.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
