Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Parapedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Parapedobacter |
| Species | Parapedobacter koreensis |
| Strain | strain Jip14 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1434869 bp
Thymine Count
1436882 bp
Guanine Count
1328537 bp
Cytosine Count
1347468 bp
Genome Length
5547756 bp
Protein-coding Genes
4830 genes
Non-Coding Genes
46 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05421740_101759 | Not Available | Positive | 893945 - 894097 | 5798.23 |
| tonb-linked outer membrane protein, susc/raga family | SAMN05421740_101760 | Not Available | Positive | 894198 - 897335 | 114796.0 |
| ragb/susd domain-containing protein | SAMN05421740_101761 | Not Available | Positive | 897349 - 898719 | 50357.0 |
| zinc carboxypeptidase | SAMN05421740_101762 | Not Available | Positive | 898773 - 901346 | 93370.6 |
| zinc carboxypeptidase | SAMN05421740_101763 | Not Available | Positive | 901384 - 903960 | 95093.9 |
| hypothetical protein | SAMN05421740_101764 | Not Available | Negative | 904035 - 904253 | 8048.61 |
| transporter, cpa2 family | SAMN05421740_101765 | Not Available | Negative | 904304 - 906568 | 82947.7 |
| two component transcriptional regulator, lyttr family | SAMN05421740_101766 | Not Available | Negative | 906680 - 907396 | 27320.8 |
| histidine kinase | SAMN05421740_101767 | Not Available | Negative | 907383 - 908117 | 27920.9 |
| iron complex outermembrane recepter protein | SAMN05421740_101768 | Not Available | Negative | 908218 - 910764 | 92325.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
