Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Parapedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Parapedobacter |
| Species | Parapedobacter koreensis |
| Strain | strain Jip14 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1434869 bp
Thymine Count
1436882 bp
Guanine Count
1328537 bp
Cytosine Count
1347468 bp
Genome Length
5547756 bp
Protein-coding Genes
4830 genes
Non-Coding Genes
46 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glucosamine-6-phosphate deaminase | SAMN05421740_101748 | Not Available | Negative | 878398 - 880326 | 72818.4 |
| tat (twin-arginine translocation) pathway signal sequence | SAMN05421740_101749 | Not Available | Positive | 880547 - 882040 | 55504.7 |
| 2-keto-4-methylthiobutyrate aminotransferase apoenzyme | SAMN05421740_101750 | Not Available | Negative | 882044 - 883198 | 42960.5 |
| helix-turn-helix | SAMN05421740_101751 | Not Available | Negative | 883258 - 883611 | 13410.2 |
| aminobenzoyl-glutamate utilization protein b | SAMN05421740_101753 | Not Available | Positive | 884186 - 885628 | 51695.0 |
| peroxiredoxin | SAMN05421740_101754 | Not Available | Positive | 885676 - 886671 | 36921.7 |
| tonb-linked outer membrane protein, susc/raga family | SAMN05421740_101755 | Not Available | Positive | 886895 - 890074 | 116220.0 |
| susd family protein | SAMN05421740_101756 | Not Available | Positive | 890094 - 891596 | 57153.8 |
| fmnh2-dependent dimethyl sulfone monooxygenase | SAMN05421740_101757 | Not Available | Negative | 891658 - 892695 | 38784.8 |
| glutathione synthase/rimk-type ligase, atp-grasp superfamily | SAMN05421740_101758 | Not Available | Negative | 892692 - 893705 | 37788.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
