Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Parapedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Parapedobacter |
| Species | Parapedobacter koreensis |
| Strain | strain Jip14 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1434869 bp
Thymine Count
1436882 bp
Guanine Count
1328537 bp
Cytosine Count
1347468 bp
Genome Length
5547756 bp
Protein-coding Genes
4830 genes
Non-Coding Genes
46 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05421740_101728 | Not Available | Negative | 853521 - 854639 | 40697.3 |
| putative membrane protein | SAMN05421740_101729 | Not Available | Positive | 854749 - 855108 | 12976.4 |
| nad(p)-dependent dehydrogenase, short-chain alcohol dehydrogenase family | SAMN05421740_101730 | Not Available | Negative | 855195 - 855938 | 25555.5 |
| transcriptional regulator, arac family | SAMN05421740_101731 | Not Available | Negative | 856035 - 856931 | 34193.3 |
| protein of unknown function | SAMN05421740_101732 | Not Available | Negative | 856953 - 857339 | 14534.8 |
| carbohydrate binding module (family 6) | SAMN05421740_101733 | Not Available | Positive | 857566 - 860340 | 105020.0 |
| protein of unknown function | SAMN05421740_101734 | Not Available | Positive | 860353 - 861846 | 55172.0 |
| xylose isomerase-like tim barrel | SAMN05421740_101735 | Not Available | Positive | 861859 - 862746 | 33327.6 |
| uncharacterized membrane protein | SAMN05421740_101736 | Not Available | Positive | 862746 - 864149 | 50884.9 |
| protein of unknown function | SAMN05421740_101737 | Not Available | Negative | 864153 - 864776 | 23853.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
