Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Parapedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Parapedobacter |
| Species | Parapedobacter koreensis |
| Strain | strain Jip14 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1434869 bp
Thymine Count
1436882 bp
Guanine Count
1328537 bp
Cytosine Count
1347468 bp
Genome Length
5547756 bp
Protein-coding Genes
4830 genes
Non-Coding Genes
46 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uncharacterized membrane protein yoak, upf0700 family | SAMN05421740_101718 | Not Available | Negative | 843906 - 844724 | 30679.6 |
| hypothetical protein | SAMN05421740_101719 | Not Available | Negative | 844768 - 845217 | 17192.0 |
| hypothetical protein | SAMN05421740_101720 | Not Available | Negative | 845227 - 845727 | 18713.7 |
| signal transduction histidine kinase | SAMN05421740_101721 | Not Available | Negative | 845874 - 847217 | 51101.3 |
| two component transcriptional regulator, winged helix family | SAMN05421740_101722 | Not Available | Negative | 847272 - 847970 | 25971.6 |
| solute:na+ symporter, sss family | SAMN05421740_101723 | Not Available | Negative | 848065 - 849639 | 57657.9 |
| transcriptional regulator, laci family | SAMN05421740_101724 | Not Available | Negative | 849639 - 850676 | 38353.0 |
| hypothetical protein | SAMN05421740_101725 | Not Available | Negative | 850819 - 851193 | 13609.5 |
| acetyl esterase/lipase | SAMN05421740_101726 | Not Available | Negative | 851205 - 852140 | 34391.1 |
| cubico group peptidase, beta-lactamase class c family | SAMN05421740_101727 | Not Available | Negative | 852203 - 853411 | 45974.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
