Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Parapedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Parapedobacter |
| Species | Parapedobacter koreensis |
| Strain | strain Jip14 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1434869 bp
Thymine Count
1436882 bp
Guanine Count
1328537 bp
Cytosine Count
1347468 bp
Genome Length
5547756 bp
Protein-coding Genes
4830 genes
Non-Coding Genes
46 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| large subunit ribosomal protein l29 | SAMN05421740_101708 | Not Available | Negative | 837604 - 837837 | 8418.16 |
| large subunit ribosomal protein l16 | SAMN05421740_101709 | Not Available | Negative | 837956 - 838372 | 15749.6 |
| ssu ribosomal protein s3p | SAMN05421740_101710 | Not Available | Negative | 838430 - 839308 | 32039.6 |
| lsu ribosomal protein l22p | SAMN05421740_101711 | Not Available | Negative | 839320 - 839754 | 16325.0 |
| small subunit ribosomal protein s19 | SAMN05421740_101712 | Not Available | Negative | 839761 - 839964 | 7702.35 |
| lsu ribosomal protein l2p | SAMN05421740_101713 | Not Available | Negative | 840027 - 840851 | 29760.3 |
| large subunit ribosomal protein l23 | SAMN05421740_101714 | Not Available | Negative | 840858 - 841148 | 10808.4 |
| lsu ribosomal protein l4p | SAMN05421740_101715 | Not Available | Negative | 841153 - 841782 | 22929.6 |
| lsu ribosomal protein l3p | SAMN05421740_101716 | Not Available | Negative | 841787 - 842374 | 20996.1 |
| glycosyl hydrolase family 88 | SAMN05421740_101717 | Not Available | Negative | 842523 - 843791 | 47256.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
