Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Parapedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Parapedobacter |
| Species | Parapedobacter koreensis |
| Strain | strain Jip14 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1434869 bp
Thymine Count
1436882 bp
Guanine Count
1328537 bp
Cytosine Count
1347468 bp
Genome Length
5547756 bp
Protein-coding Genes
4830 genes
Non-Coding Genes
46 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05421740_10158 | Not Available | Positive | 70286 - 70666 | 14505.4 |
| protein of unknown function | SAMN05421740_10159 | Not Available | Negative | 70738 - 72000 | 45705.0 |
| outer membrane receptor proteins, mostly fe transport | SAMN05421740_10160 | Not Available | Negative | 72017 - 74164 | 79325.1 |
| hypothetical protein | SAMN05421740_10161 | Not Available | Negative | 74302 - 74997 | 25336.3 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN05421740_10162 | Not Available | Negative | 75066 - 75611 | 21350.8 |
| dinb superfamily protein | SAMN05421740_10163 | Not Available | Negative | 75694 - 76320 | 23299.4 |
| nucleotide-binding universal stress protein, uspa family | SAMN05421740_10164 | Not Available | Positive | 76507 - 77316 | 30030.8 |
| outer membrane protein beta-barrel domain-containing protein | SAMN05421740_10165 | Not Available | Negative | 77346 - 78137 | 27990.6 |
| taurine catabolism dioxygenase taud, tfda family | SAMN05421740_10166 | Not Available | Negative | 78252 - 79121 | 33234.6 |
| calcineurin-like phosphoesterase | SAMN05421740_10167 | Not Available | Negative | 79389 - 80255 | 32565.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
