Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Parapedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Parapedobacter |
| Species | Parapedobacter koreensis |
| Strain | strain Jip14 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1434869 bp
Thymine Count
1436882 bp
Guanine Count
1328537 bp
Cytosine Count
1347468 bp
Genome Length
5547756 bp
Protein-coding Genes
4830 genes
Non-Coding Genes
46 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uncharacterized iron-regulated membrane protein | SAMN05421740_101668 | Not Available | Positive | 800257 - 801762 | 56282.7 |
| uracil phosphoribosyltransferase | SAMN05421740_101669 | Not Available | Positive | 801858 - 802502 | 23716.8 |
| hypothetical protein | SAMN05421740_101670 | Not Available | Positive | 802632 - 803105 | 17679.4 |
| hexosaminidase | SAMN05421740_101671 | Not Available | Negative | 803107 - 805374 | 85674.8 |
| y_y_y domain-containing protein | SAMN05421740_101672 | Not Available | Positive | 805478 - 808384 | 111509.0 |
| tonb-linked outer membrane protein, susc/raga family | SAMN05421740_101673 | Not Available | Positive | 808645 - 811761 | 112551.0 |
| starch-binding associating with outer membrane | SAMN05421740_101674 | Not Available | Positive | 811773 - 813293 | 56002.0 |
| hypothetical protein | SAMN05421740_101675 | Not Available | Positive | 813322 - 814266 | 33303.7 |
| glycosyl hydrolases family 16 | SAMN05421740_101676 | Not Available | Positive | 814352 - 815209 | 32531.8 |
| beta-glucosidase | SAMN05421740_101677 | Not Available | Positive | 815224 - 817533 | 85505.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
