Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Parapedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Parapedobacter |
| Species | Parapedobacter koreensis |
| Strain | strain Jip14 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1434869 bp
Thymine Count
1436882 bp
Guanine Count
1328537 bp
Cytosine Count
1347468 bp
Genome Length
5547756 bp
Protein-coding Genes
4830 genes
Non-Coding Genes
46 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| na+/h+-dicarboxylate symporter | SAMN05421740_101638 | Not Available | Negative | 767560 - 768828 | 45284.2 |
| trna u34 5-methylaminomethyl-2-thiouridine-forming methyltransferase mnmc | SAMN05421740_101639 | Not Available | Positive | 768873 - 769541 | 24742.8 |
| fkbp-type peptidyl prolyl cis-trans isomerase /apo-metallochaperone slyd | SAMN05421740_101640 | Not Available | Negative | 769547 - 770044 | 17833.0 |
| hypothetical protein | SAMN05421740_101641 | Not Available | Negative | 770085 - 772133 | 78412.4 |
| phosphohistidine phosphatase, sixa | SAMN05421740_101642 | Not Available | Negative | 772111 - 772596 | 18046.2 |
| n-terminal domain of galactosyltransferase | SAMN05421740_101643 | Not Available | Positive | 772764 - 773561 | 30057.4 |
| hypothetical protein | SAMN05421740_101644 | Not Available | Positive | 773577 - 773918 | 13734.5 |
| glycosyltransferase, gt2 family | SAMN05421740_101645 | Not Available | Negative | 773913 - 775028 | 41931.8 |
| glycosyl transferase family 2 | SAMN05421740_101646 | Not Available | Negative | 775055 - 776068 | 37424.4 |
| glycosyltransferase involved in cell wall bisynthesis | SAMN05421740_101647 | Not Available | Negative | 776088 - 777095 | 38839.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
