Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Parapedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Parapedobacter |
| Species | Parapedobacter koreensis |
| Strain | strain Jip14 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1434869 bp
Thymine Count
1436882 bp
Guanine Count
1328537 bp
Cytosine Count
1347468 bp
Genome Length
5547756 bp
Protein-coding Genes
4830 genes
Non-Coding Genes
46 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rna polymerase sigma-70 factor, ecf subfamily | SAMN05421740_101628 | Not Available | Positive | 758199 - 758696 | 19533.1 |
| hypothetical protein | SAMN05421740_101629 | Not Available | Positive | 758683 - 759282 | 23809.2 |
| hypothetical protein | SAMN05421740_101630 | Not Available | Negative | 759438 - 759536 | 3895.61 |
| thiol-disulfide isomerase or thioredoxin | SAMN05421740_101631 | Not Available | Positive | 759717 - 761000 | 49116.6 |
| hypothetical protein | SAMN05421740_101632 | Not Available | Positive | 761338 - 762321 | 38065.2 |
| predicted oxidoreductase, contains short-chain dehydrogenase (sdr) and duf2520 domains | SAMN05421740_101633 | Not Available | Negative | 762403 - 763167 | 26992.7 |
| cytochrome c-type biogenesis protein ccmf | SAMN05421740_101634 | Not Available | Negative | 763167 - 765614 | 91401.4 |
| cytochrome c-type biogenesis protein ccme | SAMN05421740_101635 | Not Available | Negative | 765618 - 766025 | 15183.3 |
| hypothetical protein | SAMN05421740_101636 | Not Available | Positive | 766162 - 767157 | 38136.5 |
| ribosome-associated protein | SAMN05421740_101637 | Not Available | Negative | 767154 - 767573 | 15658.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
