Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Parapedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Parapedobacter |
| Species | Parapedobacter koreensis |
| Strain | strain Jip14 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1434869 bp
Thymine Count
1436882 bp
Guanine Count
1328537 bp
Cytosine Count
1347468 bp
Genome Length
5547756 bp
Protein-coding Genes
4830 genes
Non-Coding Genes
46 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acyl-coa dehydrogenase | SAMN05421740_101618 | Not Available | Negative | 750396 - 751535 | 41512.8 |
| catechol 2,3-dioxygenase | SAMN05421740_101619 | Not Available | Negative | 751641 - 752138 | 18899.4 |
| ecsc protein family protein | SAMN05421740_101620 | Not Available | Negative | 752179 - 752928 | 28548.1 |
| 1-cys peroxiredoxin | SAMN05421740_101621 | Not Available | Positive | 753034 - 753669 | 23542.9 |
| trypsin-like peptidase domain-containing protein | SAMN05421740_101622 | Not Available | Negative | 753727 - 754827 | 40769.4 |
| rna polymerase sigma factor, sigma-70 family | SAMN05421740_101623 | Not Available | Negative | 754835 - 755401 | 21616.0 |
| geranylgeranyl diphosphate synthase, type ii | SAMN05421740_101624 | Not Available | Positive | 755537 - 756511 | 36040.5 |
| hypothetical protein | SAMN05421740_101625 | Not Available | Negative | 756495 - 756605 | 4241.03 |
| predicted amidohydrolase | SAMN05421740_101626 | Not Available | Positive | 756868 - 757656 | 30595.9 |
| hypothetical protein | SAMN05421740_101627 | Not Available | Negative | 757704 - 758093 | 14831.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
