Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Parapedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Parapedobacter |
| Species | Parapedobacter koreensis |
| Strain | strain Jip14 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1434869 bp
Thymine Count
1436882 bp
Guanine Count
1328537 bp
Cytosine Count
1347468 bp
Genome Length
5547756 bp
Protein-coding Genes
4830 genes
Non-Coding Genes
46 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05421740_101598 | Not Available | Negative | 719301 - 719789 | 17927.1 |
| homoserine o-acetyltransferase | SAMN05421740_101599 | Not Available | Negative | 719806 - 720459 | 24231.8 |
| protein of unknown function | SAMN05421740_101600 | Not Available | Negative | 720470 - 722194 | 67025.2 |
| hypothetical protein | SAMN05421740_101601 | Not Available | Negative | 722345 - 723322 | 35867.0 |
| glycerate dehydrogenase | SAMN05421740_101602 | Not Available | Negative | 723336 - 723509 | 5926.08 |
| malate synthase | SAMN05421740_101603 | Not Available | Negative | 723538 - 725418 | 69666.0 |
| l-lactate dehydrogenase complex protein lldg | SAMN05421740_101604 | Not Available | Negative | 725436 - 726032 | 21488.3 |
| l-lactate dehydrogenase complex protein lldf | SAMN05421740_101605 | Not Available | Negative | 726049 - 727416 | 51050.2 |
| l-lactate dehydrogenase complex protein llde | SAMN05421740_101606 | Not Available | Negative | 727422 - 728183 | 27763.3 |
| tat (twin-arginine translocation) pathway signal sequence | SAMN05421740_101607 | Not Available | Negative | 728299 - 729840 | 56671.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
