Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Parapedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Parapedobacter |
| Species | Parapedobacter koreensis |
| Strain | strain Jip14 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1434869 bp
Thymine Count
1436882 bp
Guanine Count
1328537 bp
Cytosine Count
1347468 bp
Genome Length
5547756 bp
Protein-coding Genes
4830 genes
Non-Coding Genes
46 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| starch-binding associating with outer membrane | SAMN05421740_10148 | Not Available | Positive | 48089 - 49861 | 65339.5 |
| sucrose-6-phosphate hydrolase sacc, gh32 family | SAMN05421740_10149 | Not Available | Positive | 49874 - 52084 | 82116.7 |
| quinoprotein glucose dehydrogenase | SAMN05421740_10150 | Not Available | Positive | 52084 - 54213 | 76105.8 |
| putative collagen-binding domain of a collagenase | SAMN05421740_10151 | Not Available | Positive | 54228 - 55616 | 53032.7 |
| inosine-uridine nucleoside n-ribohydrolase | SAMN05421740_10152 | Not Available | Positive | 55701 - 56666 | 34908.3 |
| hypothetical protein | SAMN05421740_10153 | Not Available | Negative | 56692 - 60090 | 126745.0 |
| hypothetical protein | SAMN05421740_10154 | Not Available | Negative | 60256 - 60666 | 15154.9 |
| hypothetical protein | SAMN05421740_10155 | Not Available | Negative | 60680 - 65635 | 182152.0 |
| dna polymerase-3 subunit alpha | SAMN05421740_10156 | Not Available | Negative | 65825 - 68761 | 111358.0 |
| dna polymerase-4 | SAMN05421740_10157 | Not Available | Negative | 68742 - 69938 | 45027.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
