Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Parapedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Parapedobacter |
| Species | Parapedobacter koreensis |
| Strain | strain Jip14 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1434869 bp
Thymine Count
1436882 bp
Guanine Count
1328537 bp
Cytosine Count
1347468 bp
Genome Length
5547756 bp
Protein-coding Genes
4830 genes
Non-Coding Genes
46 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna segregation atpase ftsk/spoiiie, s-dna-t family | SAMN05421740_101568 | Not Available | Positive | 685007 - 687583 | 95512.6 |
| outer membrane lipoprotein-sorting protein | SAMN05421740_101569 | Not Available | Positive | 687587 - 688252 | 24702.1 |
| transglycosylase slt domain-containing protein | SAMN05421740_101570 | Not Available | Negative | 688274 - 689077 | 30465.6 |
| 23s rrna pseudouridine2605 synthase | SAMN05421740_101571 | Not Available | Positive | 689323 - 690414 | 42105.8 |
| predicted phosphohydrolase, cof family, had superfamily | SAMN05421740_101572 | Not Available | Positive | 690501 - 690968 | 17578.9 |
| hypothetical protein | SAMN05421740_101573 | Not Available | Negative | 690985 - 691980 | 37835.5 |
| dna-directed rna polymerase subunit beta' | SAMN05421740_101574 | Not Available | Negative | 692085 - 696365 | 159679.0 |
| dna-directed rna polymerase subunit beta | SAMN05421740_101575 | Not Available | Negative | 696400 - 700209 | 142693.0 |
| large subunit ribosomal protein l7/l12 | SAMN05421740_101576 | Not Available | Negative | 700384 - 700764 | 12993.6 |
| lsu ribosomal protein l10p | SAMN05421740_101577 | Not Available | Negative | 700843 - 701361 | 18360.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
